Compression of next-generation sequencing reads aided by highly
efficient de novo assembly
Daniel C. Jones; Walter L. Ruzzo; Xinxia Peng; Michael G. Katze — Nucleic Acids Research 2012; doi: 10.1093/nar/gks754
Quip is distributed as pristine ANSI C99 source code, compatible with any vaguely Unix-like operating system.Download quip-1.1.6.tar.gz
This version of Quip includes many refinements, including reference-based compression of SAM/BAM files.