Params: release/cmzasha --no-stderr --filter 150 15 /home/kasiaw/Rfam_7.0/CM/RF00233.cm /home/kasiaw/Tetrahymena_thermophila/Tetrahymena_thermophila.fasta 1 specfile /home/kasiaw/results/Tetrahymena_thermophila.fasta/RF00233_Tymo_tRNA-like/RF00233_at15.filterspec Build: release Host: node007 pid: 27929 ---time: Mon Jul 4 14:57:22 2005 ----fastaFile: /home/kasiaw/Tetrahymena_thermophila/Tetrahymena_thermophila.fasta ----specfile: hmm /home/kasiaw/Rfam_7.0_filters/RF00233_Bordetella_compact.hmm hmm /home/kasiaw/Rfam_7.0_filters/RF00233_Bordetella_expanded.hmm 2struct-str /home/kasiaw/Rfam_7.0_filters/RF00233_Bordetella_expanded.hmm 1/remember-nuc,17,r-ACU-G-_,30,l-ACG-U-_,49,r-AGU-C-_,70,l-CGU-A-_ ----hmm-from-cmFileName: /home/kasiaw/Rfam_7.0/CM/RF00233.cm ----hmm-build-info: ;(default construction of HMM) Params: release/cmzasha --create-rigorous-filter 150 15 /home/kasiaw/Rfam_7.0/CM/RF00233.cm /home/kasiaw/Rfam_7.0_filters data/default.filtercreationspec Build: release Host: node003 pid: 29194 ;Params: release/cmzasha --create-rigorous-filter 150 15 /home/kasiaw/Rfam_7.0/CM/RF00233.cm /home/kasiaw/Rfam_7.0_filters data/default.filtercreationspec Build: release Host: node003 pid: 29194 ----2struct-info: only-hmm ----hmm-from-cmFileName: /home/kasiaw/Rfam_7.0/CM/RF00233.cm ----hmm-build-info: ;(default construction of HMM) Params: release/cmzasha --create-rigorous-filter 150 15 /home/kasiaw/Rfam_7.0/CM/RF00233.cm /home/kasiaw/Rfam_7.0_filters data/default.filtercreationspec Build: release Host: node003 pid: 29194 ;Params: release/cmzasha --create-rigorous-filter 150 15 /home/kasiaw/Rfam_7.0/CM/RF00233.cm /home/kasiaw/Rfam_7.0_filters data/default.filtercreationspec Build: release Host: node003 pid: 29194 ----2struct-info: only-hmm Exploded HMM has 620 states ----hmm-from-cmFileName: /home/kasiaw/Rfam_7.0/CM/RF00233.cm ----hmm-build-info: ;(default construction of HMM) Params: release/cmzasha --create-rigorous-filter 150 15 /home/kasiaw/Rfam_7.0/CM/RF00233.cm /home/kasiaw/Rfam_7.0_filters data/default.filtercreationspec Build: release Host: node003 pid: 29194 ;Params: release/cmzasha --create-rigorous-filter 150 15 /home/kasiaw/Rfam_7.0/CM/RF00233.cm /home/kasiaw/Rfam_7.0_filters data/default.filtercreationspec Build: release Host: node003 pid: 29194 ----2struct-info: 1/remember-nuc,17,r-ACU-G-_/remember-nuc,30,l-ACG-U-_/remember-nuc,49,r-AGU-C-_/remember-nuc,70,l-CGU-A-_ ----cmFile: /home/kasiaw/Rfam_7.0/CM/RF00233.cm (global) ----CM-scanning-logic: Infernal-0.55 Found 0 hits. done 2.08166e+08 nucs (frac lets thru so far=3.2810305e-05, 2d-fracLetsThru=1.67283e-05). Filter report: done 2.08166e+08 nucs (frac lets thru so far=0.00437521335, 2d-fracLetsThru=0.00226312). Filter report: done 910772 nucs (frac lets thru so far=0.0324461007, 2d-fracLetsThru=0.0320921). Filter report: done 29551 nucs (frac lets thru so far=0.23112585, 2d-fracLetsThru=0.230328). FULL: done 2.08166e+08 nucs (frac lets thru so far=3.2810305e-05, 2d-fracLetsThru=1.67283e-05). CPU time: 4082.57u 1.22s 01:08:03.78 Elapsed: 01:08:15 DONEdoneDONEdone