Params: release/cmzasha --no-stderr --filter 200 22 /home/kasiaw/Rfam_7.0/CM/RF00163.cm /home/kasiaw/Tetrahymena_thermophila/Tetrahymena_thermophila.fasta 1 specfile /home/kasiaw/results/Tetrahymena_thermophila.fasta/RF00163_Hammerhead_1/RF00163_at22.filterspec Build: release Host: node022 pid: 1451 ---time: Mon Jul 4 12:11:21 2005 ----fastaFile: /home/kasiaw/Tetrahymena_thermophila/Tetrahymena_thermophila.fasta ----specfile: hmm /home/kasiaw/Rfam_7.0_filters/RF00163_Ecoli_compact.hmm hmm /home/kasiaw/Rfam_7.0_filters/RF00163_Ecoli_expanded.hmm 2struct-str /home/kasiaw/Rfam_7.0_filters/RF00163_Ecoli_expanded.hmm 1/remember-nuc,20,r-ACU-G-_,18,l-CGU-A_,34,l-AC-G-U-_,33,r-AGU-C_ ----hmm-from-cmFileName: /home/kasiaw/Rfam_7.0/CM/RF00163.cm ----hmm-build-info: ;(default construction of HMM) Params: release/cmzasha --create-rigorous-filter 200 22 /home/kasiaw/Rfam_7.0/CM/RF00163.cm /home/kasiaw/Rfam_7.0_filters data/default.filtercreationspec Build: release Host: node011 pid: 15019 ;Params: release/cmzasha --create-rigorous-filter 200 22 /home/kasiaw/Rfam_7.0/CM/RF00163.cm /home/kasiaw/Rfam_7.0_filters data/default.filtercreationspec Build: release Host: node011 pid: 15019 ----2struct-info: only-hmm ----hmm-from-cmFileName: /home/kasiaw/Rfam_7.0/CM/RF00163.cm ----hmm-build-info: ;(default construction of HMM) Params: release/cmzasha --create-rigorous-filter 200 22 /home/kasiaw/Rfam_7.0/CM/RF00163.cm /home/kasiaw/Rfam_7.0_filters data/default.filtercreationspec Build: release Host: node011 pid: 15019 ;Params: release/cmzasha --create-rigorous-filter 200 22 /home/kasiaw/Rfam_7.0/CM/RF00163.cm /home/kasiaw/Rfam_7.0_filters data/default.filtercreationspec Build: release Host: node011 pid: 15019 ----2struct-info: only-hmm Exploded HMM has 498 states ----hmm-from-cmFileName: /home/kasiaw/Rfam_7.0/CM/RF00163.cm ----hmm-build-info: ;(default construction of HMM) Params: release/cmzasha --create-rigorous-filter 200 22 /home/kasiaw/Rfam_7.0/CM/RF00163.cm /home/kasiaw/Rfam_7.0_filters data/default.filtercreationspec Build: release Host: node011 pid: 15019 ;Params: release/cmzasha --create-rigorous-filter 200 22 /home/kasiaw/Rfam_7.0/CM/RF00163.cm /home/kasiaw/Rfam_7.0_filters data/default.filtercreationspec Build: release Host: node011 pid: 15019 ----2struct-info: 1/remember-nuc,20,r-ACU-G-_/remember-nuc,18,l-CGU-A_/remember-nuc,34,l-AC-G-U-_/remember-nuc,33,r-AGU-C_ ----cmFile: /home/kasiaw/Rfam_7.0/CM/RF00163.cm (global) ----CM-scanning-logic: Infernal-0.55 Found 0 hits. done 2.08166e+08 nucs (frac lets thru so far=0.000279050924, 2d-fracLetsThru=0.000141755). Filter report: done 2.08166e+08 nucs (frac lets thru so far=0.0734763915, 2d-fracLetsThru=0.0409064). Filter report: done 1.52953e+07 nucs (frac lets thru so far=0.0197760634, 2d-fracLetsThru=0.0182352). Filter report: done 302481 nucs (frac lets thru so far=0.192041814, 2d-fracLetsThru=0.190036). FULL: done 2.08166e+08 nucs (frac lets thru so far=0.000279050924, 2d-fracLetsThru=0.000141755). CPU time: 2429.03u 0.94s 00:40:29.97 Elapsed: 00:40:34 DONEdoneDONEdone